STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27256.1Isoprenylcysteine carboxyl methyltransferase family protein; Identified by match to protein family HMM PF04140. (175 aa)    
Predicted Functional Partners:
speB
Streptopain; Identified by match to protein family HMM PF01640.
  
    0.689
EGJ28166.1
YcaO-like family; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR03604.
  
     0.671
EGJ26928.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716.
  
     0.579
hsdS2
Hypothetical protein.
  
     0.565
EGJ27502.1
Hypothetical protein.
  
     0.548
EGJ27972.1
LPXTG-motif cell wall anchor domain protein.
  
     0.545
yvgN
Glyoxal reductase; Identified by match to protein family HMM PF00248.
       0.518
sagH
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
  
     0.486
mecA
Negative regulator of genetic competence (MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
     0.481
EGJ27496.1
Identified by match to protein family HMM PF01261.
  
    0.467
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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