STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citD_2Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase. (97 aa)    
Predicted Functional Partners:
citE_1
Putative citrate (pro-3S)-lyase, beta subunit; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.989
citF_2
Citrate lyase, alpha subunit; Identified by match to protein family HMM PF04223; match to protein family HMM TIGR01584.
 
 
 0.988
citF_1
Citrate lyase, alpha subunit; Identified by match to protein family HMM PF04223; match to protein family HMM TIGR01584.
 
 
 0.958
citE
Citrate (pro-3S)-lyase, beta subunit; Identified by match to protein family HMM PF03328; match to protein family HMM TIGR01588; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.958
citC
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.955
citX
holo-ACP synthase CitX; Identified by match to protein family HMM PF03802; match to protein family HMM TIGR03124.
 
  
 0.925
citG
triphosphoribosyl-dephospho-CoA synthase CitG; Identified by match to protein family HMM PF01874; match to protein family HMM TIGR03125.
 
  
 0.925
EGJ26858.1
Membrane protein AbrB; Identified by match to protein family HMM TIGR03082.
 
     0.619
glpO
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
   
    0.616
citD_1
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
  
  
 
0.550
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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