Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26493.1 | EGJ26557.1 | STRPO_1206 | STRPO_1208 | IS861, transposase OrfA; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | 0.541 |
| EGJ26493.1 | EGJ27611.1 | STRPO_1206 | STRPO_1207 | IS861, transposase OrfA; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.773 |
| EGJ26493.1 | EGJ27838.1 | STRPO_1206 | STRPO_1205 | IS861, transposase OrfA; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Integrase core domain protein; Identified by match to protein family HMM PF00665; overlaps another CDS with the same product name. | 0.814 |
| EGJ26557.1 | EGJ26493.1 | STRPO_1208 | STRPO_1206 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | IS861, transposase OrfA; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.541 |
| EGJ26557.1 | EGJ27611.1 | STRPO_1208 | STRPO_1207 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.541 |
| EGJ26557.1 | EGJ27838.1 | STRPO_1208 | STRPO_1205 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | Integrase core domain protein; Identified by match to protein family HMM PF00665; overlaps another CDS with the same product name. | 0.541 |
| EGJ26557.1 | arcC_1 | STRPO_1208 | STRPO_1209 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family. | 0.594 |
| EGJ26557.1 | argF_1 | STRPO_1208 | STRPO_1210 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.590 |
| EGJ26557.1 | dctB | STRPO_1208 | STRPO_1211 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518. | 0.721 |
| EGJ26557.1 | glnG | STRPO_1208 | STRPO_1212 | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | YcbB domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF08664. | 0.688 |
| EGJ27611.1 | EGJ26493.1 | STRPO_1207 | STRPO_1206 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | IS861, transposase OrfA; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.773 |
| EGJ27611.1 | EGJ26557.1 | STRPO_1207 | STRPO_1208 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | 0.541 |
| EGJ27611.1 | EGJ27838.1 | STRPO_1207 | STRPO_1205 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Integrase core domain protein; Identified by match to protein family HMM PF00665; overlaps another CDS with the same product name. | 0.814 |
| EGJ27838.1 | EGJ26493.1 | STRPO_1205 | STRPO_1206 | Integrase core domain protein; Identified by match to protein family HMM PF00665; overlaps another CDS with the same product name. | IS861, transposase OrfA; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.814 |
| EGJ27838.1 | EGJ26557.1 | STRPO_1205 | STRPO_1208 | Integrase core domain protein; Identified by match to protein family HMM PF00665; overlaps another CDS with the same product name. | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | 0.541 |
| EGJ27838.1 | EGJ27611.1 | STRPO_1205 | STRPO_1207 | Integrase core domain protein; Identified by match to protein family HMM PF00665; overlaps another CDS with the same product name. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.814 |
| arcC_1 | EGJ26557.1 | STRPO_1209 | STRPO_1208 | Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family. | C4-dicarboxylate anaerobic carrier; Identified by match to protein family HMM PF03600; match to protein family HMM PF03606. | 0.594 |
| arcC_1 | argF_1 | STRPO_1209 | STRPO_1210 | Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.935 |
| arcC_1 | dctB | STRPO_1209 | STRPO_1211 | Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518. | 0.562 |
| arcC_1 | glnG | STRPO_1209 | STRPO_1212 | Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family. | YcbB domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF08664. | 0.606 |
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