STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26694.1Hypothetical protein. (421 aa)    
Predicted Functional Partners:
fasA
LytTr DNA-binding domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397.
 
 
 0.991
fasB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518.
 
  
 
0.823
rbsB
D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532.
  
 
 0.795
EGJ27868.1
ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.
   
   0.788
lytT
Sensory transduction protein LytT; Identified by match to protein family HMM PF00072; match to protein family HMM PF04397.
  
 
 0.564
EGJ26767.1
Putative lipoprotein.
  
     0.555
EGJ27978.1
Hypothetical protein.
  
     0.549
EGJ27502.1
Hypothetical protein.
  
     0.525
EGJ28166.1
YcaO-like family; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR03604.
  
     0.520
dcuS
Sensor histidine kinase.
     
 0.486
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.