STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srlAPTS system protein, glucitol/sorbitol-specific, IIC component; Identified by match to protein family HMM PF03608; match to protein family HMM TIGR00821. (182 aa)    
Predicted Functional Partners:
EGJ26544.1
Putative PTS system protein, glucitol/sorbitol-specific, IIA component; Identified by match to protein family HMM PF03829.
 
 
 0.999
srlE
PTS system protein, glucitol/sorbitol-specific, IIBC component; Identified by match to protein family HMM PF03612; match to protein family HMM PF07663; match to protein family HMM TIGR00825.
 
 
 0.999
gutM
Glucitol operon activator protein GutM; Identified by match to protein family HMM PF06923.
 
    0.995
sorD
Putative L-iditol 2-dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.988
licR_2
HTH domain protein; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279.
 
    0.969
ptsH
Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003.
    
  0.708
fabG_2
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106.
  
 
  0.625
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.625
EGJ26480.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
 
  0.625
EGJ26423.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.625
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.