STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgbH3-dehydro-L-gulonate-6-phosphate decarboxylase; Identified by match to protein family HMM PF00215. (221 aa)    
Predicted Functional Partners:
ulaD_2
Putative hexulose-6-phosphate isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR00542.
 
 
 0.994
ulaG
Hypothetical protein.
 
  
 0.972
EGJ27602.1
Putative 6-phospho 3-hexuloisomerase; Identified by match to protein family HMM PF01380.
 
 
 0.967
araD
L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596.
 
 
 0.901
ulaB_1
PTS system protein, Lactose/Cellobiose specific IIB subunit; Identified by match to protein family HMM PF02302.
 
  
 0.899
ulaC_1
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2; Identified by match to protein family HMM PF00359.
 
  
 0.877
ulaA_1
Putative sugar-specific permease, SgaT/UlaA; Identified by match to protein family HMM PF04215.
 
   
 0.856
lyx
Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
 
  
 0.791
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.771
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
     
 0.753
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.