STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaK_2Transporter, CPA2 family; Identified by match to protein family HMM PF00999. (689 aa)    
Predicted Functional Partners:
EGJ26968.1
Hypothetical protein.
       0.796
EGJ27824.1
Hypothetical protein.
 
     0.582
EGJ27368.1
Putative potassium/sodium efflux P-type ATPase, fungal-type; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494.
    
 
 0.537
EGJ26929.1
Phospholipase/carboxylesterase; Identified by match to protein family HMM PF02230.
       0.537
mhqO_2
Identified by match to protein family HMM PF00903.
       0.536
mhqO_1
Identified by match to protein family HMM PF00903.
       0.534
napA
Na+/H+ antiporter; Identified by match to protein family HMM PF00999.
   
 
 0.416
ktrB
Putative ATP synthase F0, A subunit; Identified by match to protein family HMM PF02386.
   
 
 0.416
mntH
Manganese transport protein MntH; Identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197.
 
     0.415
EGJ27237.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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