STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27506.1Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (186 aa)    
Predicted Functional Partners:
ydaF
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.703
EGJ27984.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
     0.667
EGJ27953.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
  
    0.649
nudC
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
       0.563
EGJ27674.1
Identified by match to protein family HMM PF04229.
 
     0.512
hutG
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
     
 0.465
rpmG
Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.
       0.465
rpmF
Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.
       0.444
EGJ26717.1
Hypothetical protein.
 
  
  0.437
EGJ28136.1
TipAS antibiotic-recognition domain protein; Identified by match to protein family HMM PF00376; match to protein family HMM PF07739.
  
    0.415
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.