EGJ27355.1 protein (Streptococcus porcinus) - STRING interaction network

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Score

EGJ27355.1

S4 domain protein; Identified by match to protein family HMM PF01479. (90 aa)

Predicted Functional Partners:

rplS

0.945

rplQ

0.930

rpmB

0.930

fbpS

0.928

rpmH

0.925

rplN

0.923

rplV

0.922

rplM

0.922

rplT

0.920

rpmA

0.918

Your Current Organism:

Streptococcus porcinus

NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGJ27355.1	fbpS	STRPO_1398	STRPO_0147	S4 domain protein; Identified by match to protein family HMM PF01479.	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	0.928
EGJ27355.1	rplM	STRPO_1398	STRPO_1730	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.922
EGJ27355.1	rplN	STRPO_1398	STRPO_1460	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.923
EGJ27355.1	rplQ	STRPO_1398	STRPO_1476	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.930
EGJ27355.1	rplS	STRPO_1398	STRPO_0631	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.945
EGJ27355.1	rplT	STRPO_1398	STRPO_0563	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.920
EGJ27355.1	rplV	STRPO_1398	STRPO_1455	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.922
EGJ27355.1	rpmA	STRPO_1398	STRPO_0548	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.918
EGJ27355.1	rpmB	STRPO_1398	STRPO_1785	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.930
EGJ27355.1	rpmH	STRPO_1398	STRPO_1223	S4 domain protein; Identified by match to protein family HMM PF01479.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.925
fbpS	EGJ27355.1	STRPO_0147	STRPO_1398	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	S4 domain protein; Identified by match to protein family HMM PF01479.	0.928
fbpS	rplM	STRPO_0147	STRPO_1730	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.946
fbpS	rplN	STRPO_0147	STRPO_1460	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.920
fbpS	rplQ	STRPO_0147	STRPO_1476	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.770
fbpS	rplS	STRPO_0147	STRPO_0631	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.855
fbpS	rplT	STRPO_0147	STRPO_0563	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.770
fbpS	rplV	STRPO_0147	STRPO_1455	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.915
fbpS	rpmA	STRPO_0147	STRPO_0548	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.770
fbpS	rpmB	STRPO_0147	STRPO_1785	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.770
fbpS	rpmH	STRPO_0147	STRPO_1223	Fibronectin-binding protein A, N-terminal domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05670; match to protein family HMM PF05833.	Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.770