rplD protein (Streptococcus porcinus) - STRING interaction network

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Score

rplD

50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (207 aa)

Predicted Functional Partners:

rpsA

0.999

rpsT

0.999

rplL

0.999

rplJ

0.999

rpsP

0.999

rpmA

0.999

rplU

0.999

rplT

0.999

rpmI

0.999

rpsU

0.999

Your Current Organism:

Streptococcus porcinus

NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplD	rplJ	STRPO_1451	STRPO_0500	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.999
rplD	rplL	STRPO_1451	STRPO_0499	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L7/L12; Identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855.	0.999
rplD	rplT	STRPO_1451	STRPO_0563	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplD	rplU	STRPO_1451	STRPO_0550	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplD	rpmA	STRPO_1451	STRPO_0548	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplD	rpmI	STRPO_1451	STRPO_0564	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplD	rpsA	STRPO_1451	STRPO_0243	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Putative ribosomal protein S1; Identified by match to protein family HMM PF00575.	0.999
rplD	rpsP	STRPO_1451	STRPO_0537	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplD	rpsT	STRPO_1451	STRPO_0358	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.999
rplD	rpsU	STRPO_1451	STRPO_0592	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.	0.999
rplJ	rplD	STRPO_0500	STRPO_1451	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplJ	rplL	STRPO_0500	STRPO_0499	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L7/L12; Identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855.	0.999
rplJ	rplT	STRPO_0500	STRPO_0563	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplJ	rplU	STRPO_0500	STRPO_0550	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplJ	rpmA	STRPO_0500	STRPO_0548	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplJ	rpmI	STRPO_0500	STRPO_0564	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplJ	rpsA	STRPO_0500	STRPO_0243	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Putative ribosomal protein S1; Identified by match to protein family HMM PF00575.	0.998
rplJ	rpsP	STRPO_0500	STRPO_0537	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplJ	rpsT	STRPO_0500	STRPO_0358	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.999
rplJ	rpsU	STRPO_0500	STRPO_0592	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.	0.999