STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28120.1Identified by match to protein family HMM PF06279. (121 aa)    
Predicted Functional Partners:
EGJ28217.1
Identified by match to protein family HMM PF06619.
  
     0.687
comYC
Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
 
     0.669
EGJ26995.1
Bacterial membrane protein YfhO; Identified by match to protein family HMM PF09586.
  
     0.655
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.640
EGJ26597.1
M protein trans-acting positive regulator; Identified by match to protein family HMM PF05043; match to protein family HMM PF08270.
  
     0.604
EGJ27474.1
Putative ComG operon protein 1; Identified by match to protein family HMM PF00437.
       0.598
EGJ27475.1
Type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482.
 
     0.594
EGJ28332.1
Identified by match to protein family HMM PF07050; Belongs to the UPF0342 family.
  
     0.567
EGJ27978.1
Hypothetical protein.
  
     0.565
EGJ27342.1
Hypothetical protein.
 
     0.553
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.