STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
gmuC_2Putative PTS system protein, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (433 aa)    
Predicted Functional Partners:
gmuB
PTS system protein, Lactose/Cellobiose specific IIB subunit; Identified by match to protein family HMM PF02302.
 
 
 0.997
chbA
Putative N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF02255.
 
 
 0.976
lacF
Lactose-specific phosphotransferase enzyme IIA component; Identified by match to protein family HMM PF02255; match to protein family HMM TIGR00823.
 
 
 0.913
celC
Cellobiose PTS family porter IIA component; Identified by match to protein family HMM PF02255.
 
 
 0.913
celB
Cellobiose PTS family porter IIB component; Identified by match to protein family HMM PF02302.
 
 
 0.820
EGJ27211.1
6-phospho-beta-glucosidase; Identified by match to protein family HMM PF00232.
  
 
 0.750
celA
6-phospho-beta-glucosidase; Identified by match to protein family HMM PF00232; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.750
EGJ26942.1
Identified by match to protein family HMM PF05913.
 
  
 0.680
lacG
6-phospho-beta-galactosidase; Identified by match to protein family HMM PF00232; match to protein family HMM TIGR01233; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.635
chbC
PTS system protein, lactose/cellobiose family IIC component; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.
  
  
 
0.616
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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