STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sagGABC transporter, ATP-binding protein SagG; Identified by match to protein family HMM PF00005. (310 aa)    
Predicted Functional Partners:
sagH
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
 
 
 0.956
sagI
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
 
 
 0.953
EGJ27405.1
Putative membrane protein.
 
 0.901
EGJ26626.1
CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
  
 
 0.793
EGJ27830.1
Hypothetical protein.
  
  
 0.782
EGJ28166.1
YcaO-like family; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR03604.
  
  
 0.779
sagB
Streptolysin associated protein SagB; Identified by match to protein family HMM TIGR03605.
  
  
 0.757
sagC
Bacteriocin biosynthesis cyclodehydratase, SagC; Identified by match to protein family HMM TIGR03603.
     
 0.751
glnP_1
Lysine-arginine-ornithine-binding periplasmic protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
    
  0.688
glnP_2
ABC transporter, permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
   
  0.688
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.