Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26575.1 | aroC | STRPO_0497 | STRPO_0558 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.926 |
| EGJ26575.1 | aroE | STRPO_0497 | STRPO_1843 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.545 |
| EGJ26575.1 | aroH | STRPO_0497 | STRPO_0633 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | Chorismate mutase; Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01805. | 0.618 |
| EGJ26575.1 | pabA | STRPO_0497 | STRPO_1671 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566. | 0.860 |
| EGJ26575.1 | pabB | STRPO_0497 | STRPO_1672 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | Aminodeoxychorismate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553. | 0.888 |
| EGJ26575.1 | yjiR | STRPO_0497 | STRPO_0378 | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392. | 0.507 |
| aroC | EGJ26575.1 | STRPO_0558 | STRPO_0497 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | 0.926 |
| aroC | aroE | STRPO_0558 | STRPO_1843 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.879 |
| aroC | aroH | STRPO_0558 | STRPO_0633 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase; Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01805. | 0.917 |
| aroC | ilvE | STRPO_0558 | STRPO_0239 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Branched-chain-amino-acid transaminase; Identified by match to protein family HMM PF01063; match to protein family HMM TIGR01123. | 0.577 |
| aroC | pabA | STRPO_0558 | STRPO_1671 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566. | 0.880 |
| aroC | pabB | STRPO_0558 | STRPO_1672 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminodeoxychorismate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553. | 0.963 |
| aroC | yjiR | STRPO_0558 | STRPO_0378 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392. | 0.736 |
| aroE | EGJ26575.1 | STRPO_1843 | STRPO_0497 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | 0.545 |
| aroE | aroC | STRPO_1843 | STRPO_0558 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.879 |
| aroE | aroH | STRPO_1843 | STRPO_0633 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Chorismate mutase; Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01805. | 0.618 |
| aroE | pabA | STRPO_1843 | STRPO_1671 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566. | 0.720 |
| aroE | pabB | STRPO_1843 | STRPO_1672 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Aminodeoxychorismate synthase, component I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553. | 0.768 |
| aroE | yjiR | STRPO_1843 | STRPO_0378 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392. | 0.507 |
| aroH | EGJ26575.1 | STRPO_0633 | STRPO_0497 | Chorismate mutase; Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01805. | Putative shikimate dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM PF08501. | 0.618 |
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