Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ27160.1 | EGJ27775.1 | STRPO_1708 | STRPO_0490 | Identified by match to protein family HMM PF01569. | AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | 0.910 |
| EGJ27160.1 | EGJ27824.1 | STRPO_1708 | STRPO_1301 | Identified by match to protein family HMM PF01569. | Hypothetical protein. | 0.567 |
| EGJ27160.1 | ntpC | STRPO_1708 | STRPO_1560 | Identified by match to protein family HMM PF01569. | ATP synthase, subunit C; Identified by match to protein family HMM PF01992. | 0.854 |
| EGJ27160.1 | ntpF | STRPO_1708 | STRPO_1561 | Identified by match to protein family HMM PF01569. | ATP synthase, subunit F; Identified by match to protein family HMM PF01990. | 0.798 |
| EGJ27160.1 | ntpI | STRPO_1708 | STRPO_1557 | Identified by match to protein family HMM PF01569. | V-type sodium ATPase, I subunit; Identified by match to protein family HMM PF01496. | 0.752 |
| EGJ27160.1 | pgsA | STRPO_1708 | STRPO_1371 | Identified by match to protein family HMM PF01569. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.583 |
| EGJ27160.1 | plsC | STRPO_1708 | STRPO_1968 | Identified by match to protein family HMM PF01569. | Acyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01553. | 0.581 |
| EGJ27160.1 | rplF | STRPO_1708 | STRPO_1465 | Identified by match to protein family HMM PF01569. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.865 |
| EGJ27160.1 | rpoZ | STRPO_1708 | STRPO_0961 | Identified by match to protein family HMM PF01569. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.736 |
| EGJ27160.1 | ugpQ_1 | STRPO_1708 | STRPO_1849 | Identified by match to protein family HMM PF01569. | Identified by match to protein family HMM PF03009. | 0.805 |
| EGJ27775.1 | EGJ27160.1 | STRPO_0490 | STRPO_1708 | AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | Identified by match to protein family HMM PF01569. | 0.910 |
| EGJ27775.1 | plsC | STRPO_0490 | STRPO_1968 | AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | Acyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01553. | 0.806 |
| EGJ27775.1 | rplF | STRPO_0490 | STRPO_1465 | AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.980 |
| EGJ27775.1 | rpoZ | STRPO_0490 | STRPO_0961 | AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.776 |
| EGJ27824.1 | EGJ27160.1 | STRPO_1301 | STRPO_1708 | Hypothetical protein. | Identified by match to protein family HMM PF01569. | 0.567 |
| ntpC | EGJ27160.1 | STRPO_1560 | STRPO_1708 | ATP synthase, subunit C; Identified by match to protein family HMM PF01992. | Identified by match to protein family HMM PF01569. | 0.854 |
| ntpC | ntpF | STRPO_1560 | STRPO_1561 | ATP synthase, subunit C; Identified by match to protein family HMM PF01992. | ATP synthase, subunit F; Identified by match to protein family HMM PF01990. | 0.999 |
| ntpC | ntpI | STRPO_1560 | STRPO_1557 | ATP synthase, subunit C; Identified by match to protein family HMM PF01992. | V-type sodium ATPase, I subunit; Identified by match to protein family HMM PF01496. | 0.999 |
| ntpF | EGJ27160.1 | STRPO_1561 | STRPO_1708 | ATP synthase, subunit F; Identified by match to protein family HMM PF01990. | Identified by match to protein family HMM PF01569. | 0.798 |
| ntpF | ntpC | STRPO_1561 | STRPO_1560 | ATP synthase, subunit F; Identified by match to protein family HMM PF01990. | ATP synthase, subunit C; Identified by match to protein family HMM PF01992. | 0.999 |
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