Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bmrA | cydA | STRPO_1741 | STRPO_1503 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. | 0.558 |
| bmrA | cydB | STRPO_1741 | STRPO_1504 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. | 0.684 |
| bmrA | cydD | STRPO_1741 | STRPO_1505 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Thiol reductant ABC exporter, CydD subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. | 0.858 |
| bmrA | ybaN | STRPO_1741 | STRPO_1234 | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | Identified by match to protein family HMM PF04304. | 0.406 |
| cydA | bmrA | STRPO_1503 | STRPO_1741 | Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.558 |
| cydA | cydB | STRPO_1503 | STRPO_1504 | Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. | Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. | 0.999 |
| cydA | cydD | STRPO_1503 | STRPO_1505 | Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. | Thiol reductant ABC exporter, CydD subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. | 0.987 |
| cydB | bmrA | STRPO_1504 | STRPO_1741 | Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.684 |
| cydB | cydA | STRPO_1504 | STRPO_1503 | Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. | Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. | 0.999 |
| cydB | cydD | STRPO_1504 | STRPO_1505 | Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. | Thiol reductant ABC exporter, CydD subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. | 0.988 |
| cydD | bmrA | STRPO_1505 | STRPO_1741 | Thiol reductant ABC exporter, CydD subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.858 |
| cydD | cydA | STRPO_1505 | STRPO_1503 | Thiol reductant ABC exporter, CydD subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. | Cytochrome d ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654. | 0.987 |
| cydD | cydB | STRPO_1505 | STRPO_1504 | Thiol reductant ABC exporter, CydD subunit; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857. | Cytochrome d ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203. | 0.988 |
| ybaN | bmrA | STRPO_1234 | STRPO_1741 | Identified by match to protein family HMM PF04304. | ABC transporter, ATP-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005. | 0.406 |