STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfT_1Cobalt transport protein; Identified by match to protein family HMM PF02361. (276 aa)    
Predicted Functional Partners:
ykoD_2
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 0.994
EGJ28152.1
Identified by match to protein family HMM PF07155.
 
 
 0.988
cbiO_1
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.981
cbiO_2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.981
bioY
Identified by match to protein family HMM PF02632.
  
 0.961
EGJ26769.1
Identified by match to protein family HMM PF01887.
 
    0.893
panT
Putative membrane protein.
   
 
 0.887
hmpT
Hypothetical protein.
  
 
 0.861
ykoD_1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 0.859
EGJ26400.1
Hypothetical protein.
  
 0.777
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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