STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26556.1Putative serine-aspartate repeat protein F; Identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR03715. (1148 aa)    
Predicted Functional Partners:
scpA_1
Putative c5a peptidase; Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280.
 
 0.848
scpA_4
Putative c5a peptidase; Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF04650; match to protein family HMM PF06280; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
 0.826
EGJ26949.1
LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF00746; match to protein family HMM PF01391; match to protein family HMM TIGR01167.
  
 0.814
spoIIIE
Stage III sporulation protein E; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.811
EGJ26629.1
Identified by match to protein family HMM PF01580.
   
 
 0.811
EGJ26966.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
 0.810
EGJ28288.1
Putative phage DNA packaging protein.
  
 0.751
lytC
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520; match to protein family HMM PF07538.
    
 0.704
dltC
D-alanine--poly(phosphoribitol) ligase, subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
   
 
 0.698
acpB
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.698
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.