STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27254.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
EGJ27878.1
Identified by match to protein family HMM PF04167; Belongs to the UPF0374 family.
 
     0.731
EGJ27426.1
Hypothetical protein.
  
     0.575
EGJ28194.1
Putative phosphoesterase; Identified by match to protein family HMM PF00149; match to protein family HMM TIGR03729.
  
     0.564
EGJ26982.1
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family.
  
     0.515
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.499
EGJ27929.1
Hypothetical protein.
  
     0.460
aroH
Chorismate mutase; Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01805.
 
  
  0.456
EGJ27259.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.453
EGJ27593.1
Branched-chain amino acid transport protein; Identified by match to protein family HMM PF05437.
  
     0.453
EGJ27524.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.