STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27525.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
licR_3
PRD domain protein; Identified by match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279.
    
  0.765
licR_2
HTH domain protein; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279.
    
  0.765
EGJ27167.1
PRD domain protein; Identified by match to protein family HMM PF00874.
    
  0.765
ulaC_2
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00359; match to protein family HMM PF00874.
    
  0.765
EGJ27545.1
PRD domain protein; Identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279.
    
  0.765
EGJ28064.1
Transporter, auxin efflux carrier family protein; Identified by match to protein family HMM PF03547.
 
     0.680
sgbH
3-dehydro-L-gulonate-6-phosphate decarboxylase; Identified by match to protein family HMM PF00215.
    
 0.543
lyx
Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
    
  0.475
ulaA_1
Putative sugar-specific permease, SgaT/UlaA; Identified by match to protein family HMM PF04215.
  
 
 0.414
ulaA_2
Putative sugar-specific permease, SgaT/UlaA; Identified by match to protein family HMM PF04215.
  
 
 0.414
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.