STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27345.1Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753. (274 aa)    
Predicted Functional Partners:
EGJ27391.1
Putative adenylate-forming enzyme; Identified by match to protein family HMM TIGR02304.
 
     0.940
EGJ28176.1
NAD-dependent epimerase/dehydratase family protein.
    0.928
EGJ27022.1
ATP-grasp domain protein; Identified by match to protein family HMM PF02655.
 
   
 0.923
EGJ28010.1
Conserved domain protein.
 
   
 0.910
EGJ26554.1
3-oxoacyl-(acyl carrier protein) synthase III; Identified by match to protein family HMM PF08541; match to protein family HMM PF08545.
 
 
 0.840
noxE-2
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
 
 0.821
noxE
NADH oxidase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
 
 
 0.808
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.720
EGJ28021.1
Identified by match to protein family HMM PF00581.
  
 0.710
EGJ28253.1
Identified by match to protein family HMM PF00581.
  
 0.710
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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