STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27391.1Putative adenylate-forming enzyme; Identified by match to protein family HMM TIGR02304. (432 aa)    
Predicted Functional Partners:
EGJ27345.1
Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753.
 
     0.940
EGJ27022.1
ATP-grasp domain protein; Identified by match to protein family HMM PF02655.
 
     0.934
EGJ28176.1
NAD-dependent epimerase/dehydratase family protein.
 
     0.925
EGJ28010.1
Conserved domain protein.
 
     0.918
gabD1
Putative succinate-semialdehyde dehydrogenase (NAD(P)(+)); Identified by match to protein family HMM PF00171.
  
 0.915
gapN
Glyceraldehyde-3-phosphate dehydrogenase (NADP+); Identified by match to protein family HMM PF00171.
  
 0.915
EGJ26554.1
3-oxoacyl-(acyl carrier protein) synthase III; Identified by match to protein family HMM PF08541; match to protein family HMM PF08545.
 
     0.840
paaI
Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369.
  
 
 0.783
yitW
Identified by match to protein family HMM PF01883.
    
 0.778
livF
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF; Identified by match to protein family HMM PF00005.
  
 
  0.748
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.