STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27088.1Putative rhamnulose-1-phosphate aldolase; Identified by match to protein family HMM PF00596. (277 aa)    
Predicted Functional Partners:
lyx
Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
  
 
 0.833
tpiA_1
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.771
araD
L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596.
  
  
  0.743
tpiA_2
Triose-phosphate isomerase; Identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419.
  
 
 0.742
fba
Fructose-1,6-bisphosphate aldolase, class II; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859.
  
 
 0.708
citE
Citrate (pro-3S)-lyase, beta subunit; Identified by match to protein family HMM PF03328; match to protein family HMM TIGR01588; Belongs to the HpcH/HpaI aldolase family.
   
    0.616
citE_1
Putative citrate (pro-3S)-lyase, beta subunit; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
   
    0.616
EGJ26771.1
PTS system protein, Lactose/Cellobiose specific IIB subunit; Identified by match to protein family HMM PF02302.
 
  
 0.614
uxaC
Glucuronate isomerase; Identified by match to protein family HMM PF02614.
  
  
 0.576
EGJ27965.1
PTS system protein Galactitol-specific IIC component; Identified by match to protein family HMM PF03611.
 
    0.575
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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