Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
comEAComE operon protein 1; Identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426. (228 aa)    
Predicted Functional Partners:
EGJ27632.1
DNA internalization competence protein ComEC/Rec2-like protein; Identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361.
 
  
 0.977
EGJ27474.1
Putative ComG operon protein 1; Identified by match to protein family HMM PF00437.
 
  
 0.918
comFA
Putative ComF operon protein 1; Identified by match to protein family HMM PF00271.
   
  
 0.903
EGJ27475.1
Type II secretion system protein F domain protein; Identified by match to protein family HMM PF00482.
  
  
 0.830
comYC
Identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532.
   
  
 0.819
outO
Bacterial peptidase A24, N-terminal domain protein; Identified by match to protein family HMM PF01478; match to protein family HMM PF06750.
   
  
 0.743
plsC
Acyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01553.
       0.731
comEB
Putative ComE operon protein 2; Identified by match to protein family HMM PF00383.
  
  
 0.681
comX
Competence-specific sigma factor ComX.
   
  
 0.671
dprA
DNA protecting protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
  
  
 0.653
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.