STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27200.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
EGJ27225.1
CHAP domain protein; Identified by match to protein family HMM PF05257; match to protein family HMM PF08481.
   
 
 0.789
isaA
Transglycosylase-like domain protein; Identified by match to protein family HMM PF06737.
  
     0.740
inlA
Leucine rich repeat protein; Identified by match to protein family HMM PF00560; match to protein family HMM PF04270.
  
     0.730
EGJ27978.1
Hypothetical protein.
  
  
  0.704
scpA_4
Putative c5a peptidase; Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF04650; match to protein family HMM PF06280; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
     0.585
EGJ27076.1
CHAP domain protein; Identified by match to protein family HMM PF05257; match to protein family HMM PF08460.
  
  
  0.573
EGJ28166.1
YcaO-like family; Identified by match to protein family HMM PF02624; match to protein family HMM TIGR03604.
  
     0.554
EGJ27934.1
Hypothetical protein.
  
     0.550
EGJ27496.1
Identified by match to protein family HMM PF01261.
  
     0.544
EGJ27574.1
Cadmium resistance transporter family protein; Identified by match to protein family HMM PF03596; match to protein family HMM TIGR00779.
  
     0.534
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.