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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ28163.1Methyltransferase domain protein; Identified by match to protein family HMM PF01596; match to protein family HMM PF08241. (223 aa)    
Predicted Functional Partners:
EGJ26702.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993.
  
 
  0.817
EGJ27775.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550.
    
 0.756
yhbU_1
Peptidase, U32 family; Identified by match to protein family HMM PF01136.
 
  
 0.737
adhP
Alcohol dehydrogenase, propanol-preferring; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
  
 
 0.732
adh
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
  0.705
yhbU_2
Peptidase, U32 family; Identified by match to protein family HMM PF01136.
 
  
 0.687
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.686
EGJ27561.1
Hypothetical protein.
    
  0.666
prsA1
Putative foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
       0.628
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
    
  0.496
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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