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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uidBPutative ATP synthase F0, A subunit. (514 aa)    
Predicted Functional Partners:
uidA_2
Glycosyl hydrolase family 2, TIM barrel domain protein; Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.860
EGJ27747.1
Haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702.
 
    0.803
nag3
Putative beta-N-acetylglucosaminidase/beta-glucosidase; Identified by match to protein family HMM PF00933.
 
   
 0.793
uxaC
Glucuronate isomerase; Identified by match to protein family HMM PF02614.
   
 0.762
iolC
Carbohydrate kinase, PfkB family; Identified by match to protein family HMM PF00294.
 
  
 0.759
nrdE.2
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.703
ndk
Nucleoside pyrophosphate kinase; Identified by match to protein family HMM PF00334.
    
  0.698
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
  0.690
pdhR
FCD domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
 
   
 0.657
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.631
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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