STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27120.1DRTGG domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF07085. (430 aa)    
Predicted Functional Partners:
ydaF
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
       0.852
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.793
EGJ27464.1
Identified by match to protein family HMM PF03631.
       0.714
EGJ26559.1
Hypothetical protein.
  
     0.676
EGJ26517.1
Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family.
  
   
 0.653
EGJ26836.1
Identified by match to protein family HMM PF06135; Belongs to the UPF0297 family.
      
 0.612
EGJ26676.1
Hypothetical protein.
      
 0.612
EGJ27252.1
Identified by match to protein family HMM PF04296.
      
 0.593
EGJ26804.1
Identified by match to protein family HMM PF02674.
  
     0.559
nag3
Putative beta-N-acetylglucosaminidase/beta-glucosidase; Identified by match to protein family HMM PF00933.
       0.545
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.