STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ27871.1Replication initiator protein A, N-terminal domain protein; Identified by match to protein family HMM PF06970. (274 aa)    
Predicted Functional Partners:
EGJ27222.1
Hypothetical protein.
       0.852
EGJ28317.1
Identified by match to protein family HMM PF02534.
 
   
 0.790
EGJ27534.1
Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.
 
  
 0.744
EGJ28009.1
Putative membrane protein.
 
     0.720
hpaIIM
Modification methylase HpaII; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675.
  
  
 0.675
EGJ27481.1
Hypothetical protein.
 
    0.674
EGJ26447.1
Hypothetical protein.
       0.669
EGJ26410.1
Hypothetical protein.
       0.665
EGJ27743.1
Hypothetical protein.
       0.662
EGJ27145.1
CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
       0.662
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.