STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGJ26447.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
hpaIIM
Modification methylase HpaII; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675.
       0.796
EGJ26410.1
Hypothetical protein.
       0.786
EGJ27743.1
Hypothetical protein.
       0.776
EGJ27145.1
CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517.
       0.776
EGJ27521.1
Hypothetical protein.
       0.590
EGJ28317.1
Identified by match to protein family HMM PF02534.
       0.590
EGJ27151.1
Hypothetical protein.
       0.561
EGJ28009.1
Putative membrane protein.
       0.536
EGJ27222.1
Hypothetical protein.
       0.524
EGJ27871.1
Replication initiator protein A, N-terminal domain protein; Identified by match to protein family HMM PF06970.
       0.524
Your Current Organism:
Streptococcus porcinus
NCBI taxonomy Id: 873448
Other names: S. porcinus str. Jelinkova 176, Streptococcus porcinus str. Jelinkova 176, Streptococcus porcinus strain Jelinkova 176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.