Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGJ26815.1 | EGJ27188.1 | STRPO_2047 | STRPO_2045 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.578 |
| EGJ26815.1 | EGJ27262.1 | STRPO_2047 | STRPO_2043 | Hypothetical protein. | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | 0.432 |
| EGJ26815.1 | EGJ27527.1 | STRPO_2047 | STRPO_2046 | Hypothetical protein. | Putative TnpX site-specific recombinase; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.841 |
| EGJ26815.1 | EGJ27534.1 | STRPO_2047 | STRPO_0017 | Hypothetical protein. | Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432. | 0.779 |
| EGJ26815.1 | EGJ28316.1 | STRPO_2047 | STRPO_2044 | Hypothetical protein. | Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180. | 0.638 |
| EGJ27186.1 | EGJ27262.1 | STRPO_0075 | STRPO_2043 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | 0.696 |
| EGJ27186.1 | EGJ27527.1 | STRPO_0075 | STRPO_2046 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Putative TnpX site-specific recombinase; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.690 |
| EGJ27186.1 | EGJ27693.1 | STRPO_0075 | STRPO_2041 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Sigma-70, region 4; Identified by match to protein family HMM PF08281. | 0.639 |
| EGJ27186.1 | EGJ28066.1 | STRPO_0075 | STRPO_2040 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Sigma-70, region 4; Identified by match to protein family HMM PF04545; match to protein family HMM PF08281. | 0.717 |
| EGJ27186.1 | EGJ28096.1 | STRPO_0075 | STRPO_2042 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Hypothetical protein. | 0.701 |
| EGJ27186.1 | EGJ28141.1 | STRPO_0075 | STRPO_2038 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Hypothetical protein. | 0.704 |
| EGJ27186.1 | EGJ28316.1 | STRPO_0075 | STRPO_2044 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180. | 0.681 |
| EGJ27188.1 | EGJ26815.1 | STRPO_2045 | STRPO_2047 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.578 |
| EGJ27188.1 | EGJ27262.1 | STRPO_2045 | STRPO_2043 | Hypothetical protein; Identified by glimmer; putative. | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | 0.451 |
| EGJ27188.1 | EGJ27527.1 | STRPO_2045 | STRPO_2046 | Hypothetical protein; Identified by glimmer; putative. | Putative TnpX site-specific recombinase; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.629 |
| EGJ27188.1 | EGJ28316.1 | STRPO_2045 | STRPO_2044 | Hypothetical protein; Identified by glimmer; putative. | Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180. | 0.448 |
| EGJ27262.1 | EGJ26815.1 | STRPO_2043 | STRPO_2047 | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | Hypothetical protein. | 0.432 |
| EGJ27262.1 | EGJ27186.1 | STRPO_2043 | STRPO_0075 | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05895. | 0.696 |
| EGJ27262.1 | EGJ27188.1 | STRPO_2043 | STRPO_2045 | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | Hypothetical protein; Identified by glimmer; putative. | 0.451 |
| EGJ27262.1 | EGJ27527.1 | STRPO_2043 | STRPO_2046 | Plasmid recombination enzyme; Identified by match to protein family HMM PF01076. | Putative TnpX site-specific recombinase; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.847 |
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