Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI75494.1Competence protein F family protein. (432 aa)    
Predicted Functional Partners:
cglA
Competence protein CglA.
   
  
 0.964
EHI73346.1
Competence protein F family protein.
  
  
 0.963
EHI74496.1
ComEA family protein/general secretion pathway protein K.
   
  
 0.899
cglC
Competence protein CglC.
  
  
 0.893
cglB
Competence protein CglB.
  
  
 0.839
EHI74881.1
Putative membrane protein.
   
  
 0.805
EHI75518.1
Hypothetical protein.
   
  
 0.721
EHI74642.1
Putative Single-stranded DNA-binding protein 1; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.683
EHI74706.1
Hypothetical protein.
     
 0.671
hpf
Putative Ribosome-associated factor Y; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.656
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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