Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EHI75021.1Putative transcriptional repressor CopY. (140 aa)    
Predicted Functional Partners:
EHI73504.1
Copper-transporter protein CopZ.
  
  
 0.959
EHI73753.1
Transcriptional repressor AdcR family protein.
     
 0.836
copA
Copper-exporting ATPase.
  
  
 0.835
EHI74534.1
Hypothetical protein.
 
 
 0.759
EHI73850.1
Cation efflux system protein.
     
 0.758
EHI74145.1
Hypothetical protein; Identified by glimmer; putative.
       0.664
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.590
htpX
Putative protease HtpX-like protein; Belongs to the peptidase M48B family.
  
 
  0.549
EHI73624.1
Hypothetical protein.
       0.524
adcB
Zinc ABC transporter, permease protein.
     
 0.516
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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