Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI75496.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
EHI74731.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.754
EHI74341.1
Hypothetical protein; Overlaps another CDS with the same product name.
       0.754
EHI73731.1
Hypothetical protein.
       0.754
EHI74432.1
Hypothetical protein.
       0.705
EHI74049.1
Hypothetical protein.
      
0.664
EHI73563.1
Hypothetical protein; Identified by glimmer; putative.
       0.664
EHI74048.1
Hypothetical protein.
      
0.664
trmB
Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.450
EHI75319.1
Hypothetical protein.
       0.450
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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