ecsA protein (Streptococcus criceti) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

ecsA

ABC transporter, ATP-binding protein. (241 aa)

Predicted Functional Partners:

EHI74445.1

0.923

EHI73853.1

0.719

hit

0.638

EHI74109.1

0.632

EHI74901.1

0.631

EHI75319.1

0.593

EHI73381.1

0.586

trmB

0.533

EHI75132.1

0.514

EHI74787.1

0.478

Your Current Organism:

Streptococcus criceti

NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHI73381.1	EHI74445.1	STRCR_0062	STRCR_0059	Hypothetical protein.	ABC transporter, permease protein.	0.736
EHI73381.1	EHI75319.1	STRCR_0062	STRCR_0058	Hypothetical protein.	Hypothetical protein.	0.636
EHI73381.1	ecsA	STRCR_0062	STRCR_0060	Hypothetical protein.	ABC transporter, ATP-binding protein.	0.586
EHI73381.1	hit	STRCR_0062	STRCR_0061	Hypothetical protein.	Protein hit.	0.846
EHI73381.1	trmB	STRCR_0062	STRCR_0057	Hypothetical protein.	Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.636
EHI73853.1	EHI74787.1	STRCR_1648	STRCR_0569	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	ABC transporter, permease protein.	0.589
EHI73853.1	EHI75132.1	STRCR_1648	STRCR_1646	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.937
EHI73853.1	ecsA	STRCR_1648	STRCR_0060	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	ABC transporter, ATP-binding protein.	0.719
EHI74109.1	EHI74901.1	STRCR_1585	STRCR_1859	Hypothetical protein.	Amino acid ABC transporter, ATP-binding protein.	0.638
EHI74109.1	ecsA	STRCR_1585	STRCR_0060	Hypothetical protein.	ABC transporter, ATP-binding protein.	0.632
EHI74445.1	EHI73381.1	STRCR_0059	STRCR_0062	ABC transporter, permease protein.	Hypothetical protein.	0.736
EHI74445.1	EHI75319.1	STRCR_0059	STRCR_0058	ABC transporter, permease protein.	Hypothetical protein.	0.794
EHI74445.1	ecsA	STRCR_0059	STRCR_0060	ABC transporter, permease protein.	ABC transporter, ATP-binding protein.	0.923
EHI74445.1	hit	STRCR_0059	STRCR_0061	ABC transporter, permease protein.	Protein hit.	0.803
EHI74445.1	trmB	STRCR_0059	STRCR_0057	ABC transporter, permease protein.	Putative tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.707
EHI74787.1	EHI73853.1	STRCR_0569	STRCR_1648	ABC transporter, permease protein.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.589
EHI74787.1	ecsA	STRCR_0569	STRCR_0060	ABC transporter, permease protein.	ABC transporter, ATP-binding protein.	0.478
EHI74901.1	EHI74109.1	STRCR_1859	STRCR_1585	Amino acid ABC transporter, ATP-binding protein.	Hypothetical protein.	0.638
EHI74901.1	ecsA	STRCR_1859	STRCR_0060	Amino acid ABC transporter, ATP-binding protein.	ABC transporter, ATP-binding protein.	0.631
EHI75132.1	EHI73853.1	STRCR_1646	STRCR_1648	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.937