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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacASerine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (411 aa)    
Predicted Functional Partners:
EHI75106.1
Clostridial hydrophobic W repeat family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
   
 
 0.805
EHI73929.1
Hypothetical protein.
   
 
 0.805
EHI73680.1
Bsp protein.
   
 
 0.805
EHI75171.1
Penicillin-binding protein 2B family protein.
  
 
 0.706
pbp1A
Penicillin-binding protein 1A.
  
 
 0.676
pbpX
Penicillin-binding protein 2X.
  
 
 0.674
stk
Serine/threonine protein kinase Stk1.
   
 
 0.654
pbp2A
Penicillin-binding protein 2A.
   
 
 0.601
pbp1B
Penicillin-binding protein 1B.
   
 
 0.596
EHI74414.1
Serine-type D-Ala-D-Ala carboxypeptidase.
     
 0.576
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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