Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dacASerine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (411 aa)    
Predicted Functional Partners:
EHI75171.1
Penicillin-binding protein 2B family protein.
  
 
 0.978
pbp1A
Penicillin-binding protein 1A.
  
 
 0.977
pbpX
Penicillin-binding protein 2X.
  
 
 0.975
pbp2A
Penicillin-binding protein 2A.
   
 
 0.958
pbp1B
Penicillin-binding protein 1B.
   
 
 0.950
EHI74414.1
Serine-type D-Ala-D-Ala carboxypeptidase.
     
 0.915
EHI74428.1
Bsp family protein.
     
 0.915
stk
Serine/threonine protein kinase Stk1.
   
 
 0.595
EHI75106.1
Clostridial hydrophobic W repeat family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
   
 
 0.575
EHI73929.1
Hypothetical protein.
   
 
 0.575
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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