Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI73494.1PTS system, lactose/cellobiose specific IIB subunit family protein. (102 aa)    
Predicted Functional Partners:
EHI74128.1
Putative membrane protein.
 
 
 0.998
EHI75118.1
Hypothetical protein.
 
 
 0.973
EHI73749.1
PTS system, IIA component.
 
 
 0.969
EHI73894.1
Putative membrane protein.
 
 
 0.956
EHI73474.1
Putative membrane protein.
 
 
 0.932
EHI75563.1
PTS system, IIB component.
  
  
  0.927
EHI73497.1
Hypothetical protein.
 
     0.925
EHI74684.1
Hypothetical protein.
  
 
  0.891
ptsH
Phosphocarrier protein HPr.
    
  0.887
EHI73761.1
Hypothetical protein.
 
 
 0.846
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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