Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI75118.1Hypothetical protein. (691 aa)    
Predicted Functional Partners:
EHI73494.1
PTS system, lactose/cellobiose specific IIB subunit family protein.
 
 
 0.973
EHI74128.1
Putative membrane protein.
 
 
 0.972
fruA
PTS system, fructose specific IIABC component.
  
 
 0.916
EHI74297.1
PTS system, IIB component, lactose/cellobiose family.
 
 
 0.911
EHI73474.1
Putative membrane protein.
 
 
 0.911
EHI73497.1
Hypothetical protein.
 
     0.903
EHI73894.1
Putative membrane protein.
 
 
 0.882
EHI74656.1
Hypothetical protein.
 
 
0.876
mtlA
PTS system mannitol-specific EIICB component.
 
 
 0.872
mtlD
Putative Mannitol-1-phosphate 5-dehydrogenase.
 
 
 0.841
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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