Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
citN_1Citrate transporter. (467 aa)    
Predicted Functional Partners:
EHI75062.1
Transcriptional regulator, GntR family.
 
     0.853
citG
Hypothetical protein.
 
     0.772
EHI73840.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit.
 
     0.629
oadB
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
     0.596
EHI74315.1
Hypothetical protein.
       0.582
EHI73796.1
Hypothetical protein.
  
     0.475
citX
holo-ACP synthase.
 
     0.467
EHI74838.1
Hypothetical protein.
       0.463
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
     0.452
citF
Citrate lyase alpha chain.
 
     0.435
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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