Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
citGHypothetical protein. (296 aa)    
Predicted Functional Partners:
citX
holo-ACP synthase.
 
 0.999
EHI75116.1
[citrate (pro-3S)-lyase] ligase family protein; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
  
 0.979
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.967
citE
Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.949
citF
Citrate lyase alpha chain.
 
  
 0.931
EHI75062.1
Transcriptional regulator, GntR family.
 
     0.885
citN_1
Citrate transporter.
 
     0.772
pycB
Pyruvate carboxylase subunit B.
     
 0.506
EHI74315.1
Hypothetical protein.
       0.451
EHI73840.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit.
       0.422
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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