Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clcBMandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (375 aa)    
Predicted Functional Partners:
gudD_2
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.972
gudD_1
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.962
EHI73723.1
Hypothetical protein; Belongs to the DapA family.
 
 
 0.891
EHI74606.1
Hypothetical protein.
       0.709
rpiA
Putative Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
  0.697
EHI73693.1
3-keto-L-gulonate-6-phosphate decarboxylase UlaD family protein.
     
  0.695
dapA
Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 
 0.642
EHI74713.1
2-hydroxy-3-oxopropionate reductase family protein.
 
 
  0.604
garK
Glycerate kinase 2; Belongs to the glycerate kinase type-1 family.
       0.587
EHI75285.1
Putative membrane protein.
       0.585
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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