Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adcBZinc ABC transporter, permease protein. (268 aa)    
Predicted Functional Partners:
EHI73753.1
Transcriptional repressor AdcR family protein.
  
  
 0.999
EHI74384.1
Putative zinc transport system ATP-binding protein AdcC.
 
 0.999
EHI73446.1
Zinc-binding protein AdcA family protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
fhuC
Ferrichrome ABC transporter, ATP-binding protein FhuC.
    
 0.765
EHI74951.1
Hypothetical protein; Identified by glimmer; putative.
       0.737
EHI74697.1
Iron-dependent transcriptional regulator.
  
 
 0.665
EHI74469.1
Sugar ABC transporter, ATP-binding protein MsmK; Belongs to the ABC transporter superfamily.
    
  0.630
EHI74956.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
  
  
 0.612
ecfA
Cobalt ABC transporter, ATP-binding protein CbiO; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
     
 0.577
EHI73945.1
Amino acid ABC transporter, permease protein.
   
 
 0.550
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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