Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI74467.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
cglB
Competence protein CglB.
 
   
 0.913
EHI74458.1
Hypothetical protein.
 
     0.762
cglA
Competence protein CglA.
     
 0.757
EHI75020.1
DegV family protein.
  
   
 0.744
cglC
Competence protein CglC.
 
     0.730
EHI74101.1
Putative membrane protein.
  
     0.706
EHI74875.1
Hypothetical protein.
  
     0.664
cglD
Competence protein CglD.
       0.640
EHI74671.1
Hypothetical protein.
       0.640
EHI73772.1
Hypothetical protein.
       0.640
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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