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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI73506.1NifU family protein. (146 aa)    
Predicted Functional Partners:
csdB
Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.999
sufD
FeS assembly protein SufD.
 
  
 0.990
iscS_1
Cysteine desulfurase.
  
 0.980
iscS_2
Cysteine desulfurase.
  
 0.980
sufC
FeS assembly ATPase SufC.
 
  
 0.969
sufB
FeS assembly protein SufB.
 
  
 0.924
dnaK
Putative chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.898
EHI75065.1
Putative cardiolipin synthetase; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
   
 
 0.764
EHI74764.1
Hypothetical protein.
  
    0.612
EHI74832.1
Hypothetical protein.
  
    0.612
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.