Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI75082.1Hypothetical protein. (563 aa)    
Predicted Functional Partners:
EHI74850.1
Hypothetical protein.
  
     0.759
EHI73581.1
Hypothetical protein.
  
     0.747
comX
Competence-specific sigma factor ComX; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
     0.745
EHI75125.1
Glycosyl hydrolase, family 25.
  
   
 0.730
EHI75550.1
Hypothetical protein.
  
     0.712
EHI75403.1
Hypothetical protein.
  
     0.701
EHI75061.1
Hypothetical protein.
  
     0.699
pscB
PcsB protein.
  
     0.695
EHI74344.1
Hypothetical protein.
  
     0.672
EHI74360.1
Hypothetical protein.
  
     0.668
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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