STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI73569.1Putative choline ABC transporter, permease/choline-binding protein. (509 aa)    
Predicted Functional Partners:
EHI74033.1
Putative choline ABC transporter, ATP-binding protein.
 
 0.999
EHI73319.1
Glycine betaine/L-proline ABC transporter, ATP-binding family protein.
 
 0.999
EHI74956.1
Glycine betaine/proline ABC transporter, permease/substrate-binding protein.
 
 
0.963
EHI75556.1
An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
 
0.912
EHI74456.1
Hypothetical protein.
  
    0.887
opuAA
Glycine betaine ABC transporter, ATP-binding protein OpuAA.
 
 
 0.869
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 0.853
opuCB
Glycine betaine/L-proline ABC transporter, permease protein.
 
 
0.841
EHI74565.1
Glycine betaine/carnitine/choline ABC transporter, permease family protein.
 
 
0.840
EHI75544.1
Hypothetical protein.
  
    0.807
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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