STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHI74297.1PTS system, IIB component, lactose/cellobiose family. (99 aa)    
Predicted Functional Partners:
EHI74464.1
Hypothetical protein.
 
 
 0.998
EHI73474.1
Putative membrane protein.
 
 
 0.984
EHI73749.1
PTS system, IIA component.
 
 
 0.967
EHI73761.1
Hypothetical protein.
 
 
 0.960
EHI74128.1
Putative membrane protein.
 
 
 0.941
EHI73894.1
Putative membrane protein.
 
 
 0.936
EHI75118.1
Hypothetical protein.
 
 
 0.911
ptsH
Phosphocarrier protein HPr.
    
  0.887
EHI75563.1
PTS system, IIB component.
  
  
  0.862
EHI74684.1
Hypothetical protein.
  
 
  0.832
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.