Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHI75550.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
EHI75082.1
Hypothetical protein.
  
     0.712
EHI74635.1
N-acetylmuramoyl-L-alanine amidase, family 4 family protein.
  
     0.709
comX
Competence-specific sigma factor ComX; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
     0.553
EHI74850.1
Hypothetical protein.
  
     0.538
EHI73581.1
Hypothetical protein.
  
     0.498
xerD
Site-specific tyrosine recombinase XerD-like protein; Putative tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site. Belongs to the 'phage' integrase family. XerD-like subfamily.
  
     0.498
EHI73776.1
Putative Glucosyltransferase-I.
  
     0.492
EHI74032.1
Glucosyltransferase-S family protein.
  
     0.488
EHI73786.1
Putative Glucosyltransferase-S.
  
     0.486
EHI75357.1
Glucosyltransferase-SI family protein.
  
     0.481
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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