Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHI74111.1Transcriptional regulator. (286 aa)    
Predicted Functional Partners:
lacD
Putative tagatose 1,6-pyrophosphate aldolase; Belongs to the aldolase LacD family.
    
 0.782
EHI73460.1
Putative membrane protein.
 
     0.712
EHI75151.1
Hypothetical protein.
      
 0.613
EHI75248.1
Putative membrane protein.
  
     0.510
EHI74690.1
Hydrolase, NUDIX family.
  
 
 0.482
EHI75304.1
Hypothetical protein.
  
     0.478
EHI73664.1
Putative membrane protein.
  
     0.448
EHI73613.1
ABC transporter, ATP-binding protein.
  
     0.431
EHI74977.1
Cobalt transport family protein.
  
    0.423
EHI73871.1
ArsC family protein; Belongs to the ArsC family.
       0.408
Your Current Organism:
Streptococcus criceti
NCBI taxonomy Id: 873449
Other names: S. criceti HS-6, Streptococcus criceti HS-6, Streptococcus criceti str. HS-6, Streptococcus criceti strain HS-6
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