| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHI74389.1 | glnP | STRCR_1148 | STRCR_1146 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glutamine ABC transporter, glutamine-binding protein/permease protein. | 0.444 |
| EHI74389.1 | uvrB | STRCR_1148 | STRCR_1147 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits disso [...] | 0.677 |
| EHI74394.1 | pcrA | STRCR_0735 | STRCR_1849 | Putative excinuclease ABC, A subunit. | ATP-dependent DNA helicase PcrA. | 0.561 |
| EHI74394.1 | polA | STRCR_0735 | STRCR_0619 | Putative excinuclease ABC, A subunit. | Putative DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.578 |
| EHI74394.1 | recA | STRCR_0735 | STRCR_0309 | Putative excinuclease ABC, A subunit. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.485 |
| EHI74394.1 | uvrB | STRCR_0735 | STRCR_1147 | Putative excinuclease ABC, A subunit. | Putative UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits disso [...] | 0.988 |
| EHI74394.1 | uvrC | STRCR_0735 | STRCR_1721 | Putative excinuclease ABC, A subunit. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.747 |
| glnP | EHI74389.1 | STRCR_1146 | STRCR_1148 | Glutamine ABC transporter, glutamine-binding protein/permease protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.444 |
| glnP | polA | STRCR_1146 | STRCR_0619 | Glutamine ABC transporter, glutamine-binding protein/permease protein. | Putative DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.455 |
| glnP | uvrB | STRCR_1146 | STRCR_1147 | Glutamine ABC transporter, glutamine-binding protein/permease protein. | Putative UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits disso [...] | 0.718 |
| pcrA | EHI74394.1 | STRCR_1849 | STRCR_0735 | ATP-dependent DNA helicase PcrA. | Putative excinuclease ABC, A subunit. | 0.561 |
| pcrA | pheT | STRCR_1849 | STRCR_1809 | ATP-dependent DNA helicase PcrA. | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.530 |
| pcrA | polA | STRCR_1849 | STRCR_0619 | ATP-dependent DNA helicase PcrA. | Putative DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.941 |
| pcrA | polC | STRCR_1849 | STRCR_0118 | ATP-dependent DNA helicase PcrA. | DNA polymerase III PolC; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.556 |
| pcrA | recA | STRCR_1849 | STRCR_0309 | ATP-dependent DNA helicase PcrA. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.942 |
| pcrA | uvrA | STRCR_1849 | STRCR_0829 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.591 |
| pcrA | uvrB | STRCR_1849 | STRCR_1147 | ATP-dependent DNA helicase PcrA. | Putative UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits disso [...] | 0.710 |
| pcrA | uvrC | STRCR_1849 | STRCR_1721 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.767 |
| pheT | pcrA | STRCR_1809 | STRCR_1849 | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | ATP-dependent DNA helicase PcrA. | 0.530 |
| pheT | polA | STRCR_1809 | STRCR_0619 | phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Putative DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.942 |
